STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_3326Putative monooxygenase. (110 aa)    
Predicted Functional Partners:
B005_3893
Acetyltransferase family protein.
 
     0.771
B005_3327
Pyridine nucleotide-disulfide oxidoreductase family protein.
       0.752
B005_2667
Exonuclease SbcCD, C subunit.
  
     0.732
B005_3331
P-aminobenzoate N-oxygenase AurF family protein.
 
     0.715
B005_2665
Hypothetical protein.
  
     0.691
B005_1812
Prolyl oligopeptidase family protein.
  
     0.685
B005_1605
Copper/zinc superoxide dismutase family protein.
  
     0.669
B005_1881
Hypothetical protein.
  
     0.616
B005_2664
Hypothetical protein.
  
     0.611
B005_1749
glcNAc-PI de-N-acetylase family protein.
  
     0.608
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.