B005_3404 protein (Nocardiopsis alba) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

B005_3404

Bacterial extracellular solute-binding s, 5 Middle family protein. (567 aa)

Predicted Functional Partners:

B005_3402

0.893

B005_3401

0.888

B005_3403

0.849

B005_2310

0.655

B005_2312

0.567

B005_4187

0.560

B005_5254

0.553

B005_4148

0.551

B005_5245

0.549

B005_2105

0.541

Your Current Organism:

Nocardiopsis alba

NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
B005_2105	B005_2310	ABC transporter family protein.	Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name.	0.816
B005_2105	B005_2312	ABC transporter family protein.	Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.	0.654
B005_2105	B005_3401	ABC transporter family protein.	Binding--dependent transport system inner membrane component family protein.	0.816
B005_2105	B005_3402	ABC transporter family protein.	Binding--dependent transport system inner membrane component family protein.	0.400
B005_2105	B005_3403	ABC transporter family protein.	Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.	0.642
B005_2105	B005_3404	ABC transporter family protein.	Bacterial extracellular solute-binding s, 5 Middle family protein.	0.541
B005_2105	B005_4148	ABC transporter family protein.	Binding--dependent transport system inner membrane component family protein.	0.822
B005_2105	B005_4187	ABC transporter family protein.	Bacterial extracellular solute-binding s, 5 Middle family protein.	0.608
B005_2105	B005_5245	ABC transporter family protein.	Binding--dependent transport system inner membrane component family protein.	0.819
B005_2105	B005_5254	ABC transporter family protein.	Hypothetical protein.	0.554
B005_2310	B005_2105	Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name.	ABC transporter family protein.	0.816
B005_2310	B005_2312	Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name.	Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.	0.945
B005_2310	B005_3402	Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name.	Binding--dependent transport system inner membrane component family protein.	0.850
B005_2310	B005_3403	Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name.	Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.	0.677
B005_2310	B005_3404	Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name.	Bacterial extracellular solute-binding s, 5 Middle family protein.	0.655
B005_2310	B005_4187	Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name.	Bacterial extracellular solute-binding s, 5 Middle family protein.	0.586
B005_2310	B005_5254	Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name.	Hypothetical protein.	0.468
B005_2312	B005_2105	Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.	ABC transporter family protein.	0.654
B005_2312	B005_2310	Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.	Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name.	0.945
B005_2312	B005_3401	Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.	Binding--dependent transport system inner membrane component family protein.	0.820