STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_3500Putative molybdopterin-guanine dinucleotide biosynthesis protein. (83 aa)    
Predicted Functional Partners:
B005_2652
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein.
  
  
 0.633
B005_4850
Hypothetical protein.
  
     0.560
fdhD
Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
   
 
 0.558
B005_4421
Flavofamily protein.
  
     0.522
B005_2653
Acceptor oxidoreductase, alpha subunit.
  
  
 0.520
B005_1843
Histidine kinase-like ATPase domain protein.
  
     0.517
B005_3036
Etoposide-induced 2.4 family protein.
  
     0.484
B005_2563
Bacterial PH domain protein.
  
     0.476
B005_4161
Molybdopterin dinucleotide binding domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.474
B005_3501
Amino acid carrier family protein.
       0.442
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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