STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_3600Alpha amylase, catalytic domain protein. (555 aa)    
Predicted Functional Partners:
B005_3111
Phosphotransferase enzyme family protein.
 0.993
tam
Alpha-amylase.
 
  
 0.935
malQ
4-alpha-glucanotransferase.
  
 
 0.935
B005_3112
Alpha amylase, catalytic domain protein.
 
  
 
0.933
B005_4528
Alpha amylase, catalytic domain protein.
 
  
 
0.930
malL
Oligo-1,6-glucosidase.
  
  
 
0.921
B005_2270
pfkB carbohydrate kinase family protein; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.918
bglB
Thermostable beta-glucosidase B; Belongs to the glycosyl hydrolase 3 family.
   
 
 0.914
B005_3472
Beta-galactosidase.
  
 
 0.908
B005_3724
Beta-galactosidase.
  
 
 0.908
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.