STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_3684glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein. (152 aa)    
Predicted Functional Partners:
B005_1881
Hypothetical protein.
  
     0.612
B005_2800
ANTAR domain protein.
  
     0.606
B005_5207
Hypothetical protein.
  
     0.599
B005_3685
Major Facilitator Superfamily protein.
       0.572
B005_3893
Acetyltransferase family protein.
  
     0.560
B005_5605
NUDIX domain protein.
  
     0.546
B005_1812
Prolyl oligopeptidase family protein.
 
     0.545
B005_3680
Putative regulatory protein TetR.
  
     0.508
B005_2283
Hypothetical protein.
  
     0.500
B005_1115
AAA domain protein.
  
     0.498
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.