STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltDGlutamate synthase, NADH/NADPH, small subunit domain protein. (484 aa)    
Predicted Functional Partners:
B005_3860
GXGXG motif family protein.
 0.999
B005_0060
Oxidoreductase NAD-binding domain protein.
 
 0.965
B005_0144
Glutamine synthetase, type I.
  
 
 0.949
B005_4766
glutamate/Leucine/Phenylalanine/Valine dehydrogenase family protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.944
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
 
 0.928
B005_0158
Glutamine synthetase, type I.
  
 
 0.915
B005_0913
SIS domain protein.
    
 0.911
glmS
Glutamine-fructose-6-phosphate transaminase.
    
 0.911
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
  
 
 0.909
B005_0368
Carbamoyl-phosphate synthase L chain, ATP binding domain protein.
  
 
 0.908
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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