STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_3942Phosphotransferase enzyme family protein. (326 aa)    
Predicted Functional Partners:
B005_4731
Hypothetical protein.
  
     0.573
B005_0592
Calcineurin-like phosphoesterase family protein.
  
     0.564
B005_5295
Hypothetical protein.
  
     0.553
B005_3940
PQQ enzyme repeat family protein.
       0.498
B005_1869
Hypothetical protein.
  
     0.489
B005_4174
Pyridoxal-phosphate dependent enzyme family protein.
  
     0.471
B005_4413
YD repeat-containing domain protein.
  
     0.466
B005_0440
Bacterial regulatory s, tetR family protein.
  
     0.463
B005_4682
Putative regulatory protein MarR.
  
     0.462
B005_3512
Glycosyl transferase family 2.
 
    0.448
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.