STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_3959Bacterial extracellular solute-binding s, 5 Middle family protein. (550 aa)    
Predicted Functional Partners:
B005_3961
Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name.
 
 0.957
B005_3960
Binding--dependent transport system inner membrane component family protein; Overlaps another CDS with the same product name.
 
 
 0.946
B005_3965
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
    0.920
B005_3964
Hypothetical protein.
 
    0.879
B005_3963
Luciferase-like monooxygenase family protein.
 
    0.872
B005_3962
Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.
  
 0.824
B005_4498
Binding--dependent transport system inner membrane component family protein.
 
 0.624
B005_3966
glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein.
 
     0.617
B005_2105
ABC transporter family protein.
 
 0.597
B005_4499
Binding--dependent transport system inner membrane component family protein.
 
 
 0.549
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: medium (60%) [HD]