STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_3987ABC transporter family protein. (256 aa)    
Predicted Functional Partners:
B005_3988
Binding--dependent transport system inner membrane component family protein.
 
  
 0.978
B005_3986
NMT1-like family protein.
 
  
 0.973
B005_3985
Substrate binding domain of ABC-type glycine betaine transport system family protein.
 
  
 0.937
B005_5076
Binding--dependent transport system inner membrane component family protein.
 
  
 0.879
B005_2348
Binding--dependent transport system inner membrane component family protein.
  
 0.813
B005_5075
NMT1/THI5 like family protein.
  
  
 0.770
B005_5419
Hypothetical protein.
  
  
 0.569
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.561
B005_2347
NMT1/THI5 like family protein.
  
  
 0.556
B005_4183
ABC transporter family protein.
 
     
0.530
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.