STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_3990Ferritin-like domain protein; Belongs to the Dps family. (198 aa)    
Predicted Functional Partners:
B005_4867
Peroxiredoxin, Ohr subfamily protein.
  
  
 0.613
B005_2769
NADPH-dependent FMN reductase family protein.
  
  
 0.594
B005_0334
Peroxiredoxin, OsmC subfamily protein.
  
  
 0.574
raiA
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
    0.546
B005_2653
Acceptor oxidoreductase, alpha subunit.
    
 
 0.523
B005_3831
Putative bacterioferritin BfrB; Iron-storage protein.
   
  
 0.485
B005_5150
Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.484
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.445
B005_3989
Iron-containing alcohol dehydrogenase family protein.
       0.433
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.