STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
catACatalase. (489 aa)    
Predicted Functional Partners:
B005_5150
Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
0.939
B005_3582
FAD linked oxidase, C-terminal domain protein.
   
 0.913
B005_3583
FAD linked oxidase, C-terminal domain protein.
   
 0.913
B005_4784
FAD linked oxidase, C-terminal domain protein.
   
 0.913
B005_0217
Catalase family protein; Belongs to the catalase family.
  
  
 
0.906
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
   
 
  0.902
B005_3581
4Fe-4S binding domain protein.
     
  0.900
paaN
Phenylacetic acid degradation protein paaN.
   
 0.692
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.680
B005_1605
Copper/zinc superoxide dismutase family protein.
  
 0.651
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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