Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| B005_4080 | B005_4081 | B005_4080 | B005_4081 | Hypothetical protein. | Bifunctional nuclease family protein. | 0.609 |
| B005_4080 | B005_4082 | B005_4080 | B005_4082 | Hypothetical protein. | Transcriptional regulator, MerR family. | 0.478 |
| B005_4081 | B005_4080 | B005_4081 | B005_4080 | Bifunctional nuclease family protein. | Hypothetical protein. | 0.609 |
| B005_4081 | B005_4082 | B005_4081 | B005_4082 | Bifunctional nuclease family protein. | Transcriptional regulator, MerR family. | 0.785 |
| B005_4081 | arc | B005_4081 | B005_4096 | Bifunctional nuclease family protein. | Proteasome ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.596 |
| B005_4081 | gcvP | B005_4081 | B005_4083 | Bifunctional nuclease family protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.461 |
| B005_4082 | B005_4080 | B005_4082 | B005_4080 | Transcriptional regulator, MerR family. | Hypothetical protein. | 0.478 |
| B005_4082 | B005_4081 | B005_4082 | B005_4081 | Transcriptional regulator, MerR family. | Bifunctional nuclease family protein. | 0.785 |
| arc | B005_4081 | B005_4096 | B005_4081 | Proteasome ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | Bifunctional nuclease family protein. | 0.596 |
| gcvP | B005_4081 | B005_4083 | B005_4081 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Bifunctional nuclease family protein. | 0.461 |