STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_4210Siderophore-interacting FAD-binding domain protein. (265 aa)    
Predicted Functional Partners:
B005_4271
(2,3-dihydroxybenzoyl)adenylate synthase.
 
  
 0.696
B005_4209
Periplasmic binding family protein.
 
  
 0.694
dhbB
Isochorismatase.
 
    0.566
B005_4211
Hypothetical protein.
       0.543
B005_2344
Periplasmic binding family protein.
 
  
 0.506
B005_4273
Pyridine nucleotide-disulfide oxidoreductase family protein.
  
  
 0.483
B005_2343
fecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.478
B005_2342
fecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.467
B005_4212
ABC transporter family protein.
  
    0.454
B005_4213
ABC transporter family protein.
  
    0.454
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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