STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_4293Major Facilitator Superfamily protein. (465 aa)    
Predicted Functional Partners:
B005_4294
HAD hydrolase, IA, variant 1 family protein.
       0.778
psuG
Indigoidine synthase A like family protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
       0.778
B005_4292
Hypothetical protein.
       0.777
B005_4296
Transglutaminase-like superfamily protein.
  
    0.774
B005_4490
Major Facilitator Superfamily protein.
  
    0.760
B005_4297
acyl-CoA dehydrogenase, N-terminal domain protein.
       0.752
B005_4298
Ectoine synthase family protein.
       0.721
B005_4299
Phosphopantetheine attachment site family protein.
       0.587
B005_4300
AMP-binding enzyme family protein.
       0.587
B005_0646
Sugar (and other) transporter family protein.
  
    0.441
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.