STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_4510Hypothetical protein. (132 aa)    
Predicted Functional Partners:
B005_4509
Glycosyl transferases group 1 family protein.
 
     0.953
B005_4512
CDP-alcohol phosphatidyltransferase family protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.953
B005_4511
Putative dehydrogenase.
 
     0.951
folE
GTP cyclohydrolase I.
  
 
 0.926
B005_4505
Methyltransferase domain protein.
 
     0.836
B005_5294
Hypothetical protein.
  
  
 0.815
ribA-2
GTP cyclohydrolase II family protein; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
     
 0.790
B005_1848
Putative transcriptional regulator.
    
  0.680
B005_2279
Cyclic nucleotide-binding domain protein.
    
  0.680
B005_4056
Cyclic nucleotide-binding domain protein.
    
  0.680
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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