STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_4889Major Facilitator Superfamily protein. (429 aa)    
Predicted Functional Partners:
B005_4890
Mycothiol maleylpyruvate isomerase N-terminal domain protein.
 
     0.822
B005_4888
Bacterial regulatory helix-turn-helix s, AraC family protein.
 
     0.808
B005_5414
Bacterial Ig-like domain family protein.
 
  
 0.663
B005_2414
Nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.596
narJ
Nitrate reductase molybdenum cofactor assembly chaperone.
  
  
 0.558
narH
Nitrate reductase, beta subunit.
  
  
 0.557
B005_5272
Pyridoxamine 5'-phosphate oxidase family protein.
  
     0.492
cobA
uroporphyrinogen-III C-methyltransferase.
  
  
 0.486
narI
Respiratory nitrate reductase, gamma subunit.
  
  
 0.466
B005_3371
enoyl-(Acyl carrier) reductase family protein.
  
     0.464
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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