STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_4962Prolyl oligopeptidase family protein. (268 aa)    
Predicted Functional Partners:
B005_4577
Zinc-binding dehydrogenase family protein.
  
 0.960
B005_0574
Zinc-binding dehydrogenase family protein.
   
 
 0.904
B005_5144
Molybdopterin dinucleotide binding domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.902
B005_5145
4Fe-4S binding domain protein.
     
  0.900
amdA
Acetamidase.
     
  0.800
B005_4963
Bacterial regulatory s, tetR family protein.
 
     0.706
B005_4263
S-(hydroxymethyl)mycothiol dehydrogenase.
 
 
 0.667
B005_4961
Major Facilitator Superfamily protein.
       0.554
B005_0214
Metal-sensitive transcriptional repressor family protein.
  
  
 0.485
B005_2391
Metal-sensitive transcriptional repressor family protein.
  
  
 0.485
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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