STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_5144Molybdopterin dinucleotide binding domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (889 aa)    
Predicted Functional Partners:
B005_5145
4Fe-4S binding domain protein.
 
 
 0.997
B005_5146
Polysulfide reductase, NrfD family protein.
 
     0.954
amdA
Acetamidase.
  
  
  0.916
B005_0574
Zinc-binding dehydrogenase family protein.
  
  
 0.913
B005_4962
Prolyl oligopeptidase family protein.
    
  0.902
B005_5215
Cyclase family protein.
    
  0.901
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
mdh
Malate dehydrogenase family protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
     
 0.820
B005_0851
Malic enzyme, NAD binding domain protein.
    
 0.810
B005_3238
Malic enzyme, NAD binding domain protein.
    
 0.810
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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