STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF66321.1crotonyl-CoA carboxylase/reductase. (446 aa)    
Predicted Functional Partners:
SHF57156.1
Amino acid adenylation domain-containing protein.
  
 0.957
SHF66507.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.826
SHG23347.1
Amino acid adenylation domain-containing protein.
  
 0.823
SHF66771.1
(R)-ethylmalonyl-CoA mutase.
   
 0.796
SHF83497.1
L-erythro-3-methylmalyl-CoA dehydratase.
  
  0.780
SHH27611.1
beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
  
  
  0.746
SHF66286.1
methylmalonyl-CoA epimerase.
    
  0.727
SHF57191.1
Amino acid adenylation domain-containing protein.
  
 
 0.673
SHH05282.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
  0.657
SHH08422.1
enoyl-CoA hydratase.
    
  0.657
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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