Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHF50777.1 | SHF72212.1 | SAMN05443575_0139 | SAMN05443575_0737 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.997 |
| SHF50777.1 | SHF74398.1 | SAMN05443575_0139 | SAMN05443575_0790 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Diguanylate cyclase/phosphodiesterase. | 0.989 |
| SHF50777.1 | SHF79259.1 | SAMN05443575_0139 | SAMN05443575_0911 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.995 |
| SHF50777.1 | SHG11557.1 | SAMN05443575_0139 | SAMN05443575_1412 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | PAS/PAC sensor hybrid histidine kinase. | 0.998 |
| SHF50777.1 | SHG16229.1 | SAMN05443575_0139 | SAMN05443575_1544 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | PAS domain S-box-containing protein. | 0.992 |
| SHF50777.1 | SHG24197.1 | SAMN05443575_0139 | SAMN05443575_1784 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.733 |
| SHF50777.1 | SHG31813.1 | SAMN05443575_0139 | SAMN05443575_2004 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.998 |
| SHF50777.1 | SHG32796.1 | SAMN05443575_0139 | SAMN05443575_2029 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | PAS domain S-box-containing protein. | 0.995 |
| SHF50777.1 | SHH44708.1 | SAMN05443575_0139 | SAMN05443575_3886 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.992 |
| SHF50777.1 | SHH55612.1 | SAMN05443575_0139 | SAMN05443575_4074 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.995 |
| SHF72212.1 | SHF50777.1 | SAMN05443575_0737 | SAMN05443575_0139 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.997 |
| SHF72212.1 | SHF74398.1 | SAMN05443575_0737 | SAMN05443575_0790 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase/phosphodiesterase. | 0.989 |
| SHF72212.1 | SHF79259.1 | SAMN05443575_0737 | SAMN05443575_0911 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.997 |
| SHF72212.1 | SHG11557.1 | SAMN05443575_0737 | SAMN05443575_1412 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS/PAC sensor hybrid histidine kinase. | 0.999 |
| SHF72212.1 | SHG16229.1 | SAMN05443575_0737 | SAMN05443575_1544 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.990 |
| SHF72212.1 | SHG24197.1 | SAMN05443575_0737 | SAMN05443575_1784 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.968 |
| SHF72212.1 | SHG31813.1 | SAMN05443575_0737 | SAMN05443575_2004 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.998 |
| SHF72212.1 | SHG32796.1 | SAMN05443575_0737 | SAMN05443575_2029 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.979 |
| SHF72212.1 | SHH44708.1 | SAMN05443575_0737 | SAMN05443575_3886 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.976 |
| SHF72212.1 | SHH55612.1 | SAMN05443575_0737 | SAMN05443575_4074 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.997 |
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