STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF73909.1F420-dependent oxidoreductase, G6PDH family. (325 aa)    
Predicted Functional Partners:
SHF57156.1
Amino acid adenylation domain-containing protein.
   
 0.866
SHH26935.1
LPPG:FO 2-phospho-L-lactate transferase.
  
   
 0.722
SHF61774.1
2-phospho-L-lactate guanylyltransferase.
  
   
 0.697
SHH40481.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.692
SHH26891.1
Coenzyme F420-0:L-glutamate ligase.
 
  
 0.679
SHH05167.1
Luciferase-like monooxygenase.
  
     0.638
SHF73872.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.613
SHG25817.1
PPOX class probable F420-dependent enzyme.
  
     0.583
SHF72890.1
Luciferase-like monooxygenase.
  
     0.582
SHF47511.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.577
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.