STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF74670.1Alpha,alpha-trehalose phosphorylase. (813 aa)    
Predicted Functional Partners:
SHF74633.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/beta-phosphoglucomutase family hydrolase.
 
 0.998
SHF51277.1
Maltooligosyl trehalose hydrolase.
  
 
 0.864
SHG62387.1
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 0.859
SHF65443.1
Trehalose synthase.
  
 
 0.850
SHH10332.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
     
 0.840
SHF47915.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
 
 
 0.776
SHG62289.1
Trehalose 6-phosphate synthase.
    
 0.751
SHH57556.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
  
 
 0.736
SHF65488.1
Maltokinase.
  
  
 0.592
SHH46206.1
4-alpha-glucanotransferase.
  
  
 0.576
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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