STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG28708.1Glycosyltransferase involved in cell wall bisynthesis. (369 aa)    
Predicted Functional Partners:
SHG28782.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.808
SHG28740.1
Beta-1,4-mannosyltransferase&#160.
       0.773
SHG28813.1
Beta-galactosidase.
       0.689
SHG29721.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.686
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.678
SHF51277.1
Maltooligosyl trehalose hydrolase.
   
 0.670
SHG28667.1
Hypothetical protein.
    
  0.656
SHG22374.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.635
SHG29982.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.567
SHF65363.1
Starch phosphorylase.
   
 0.556
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.