STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG50257.1Competence protein ComEA. (284 aa)    
Predicted Functional Partners:
SHG50302.1
Competence protein ComEC.
 
  
 0.953
SHG50344.1
DNA polymerase III, delta subunit.
       0.835
SHF46292.1
Predicted acetyltransferase.
  
    0.729
SHH61810.1
Type IV pilus assembly protein PilC.
  
  
 0.722
SHH61876.1
Type IV pilus assembly protein PilB.
  
  
 0.686
SHH61779.1
Type IV pilus assembly protein PilA.
  
  
 0.615
SHG66200.1
Leader peptidase (prepilin peptidase) / N-methyltransferase.
   
  
 0.591
SHH61559.1
Leader peptidase (prepilin peptidase) / N-methyltransferase.
   
  
 0.591
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.578
SHG50175.1
EDD domain protein, DegV family.
       0.578
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.