STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG59746.1Glucokinase. (322 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.892
SHG59664.1
Arsenite efflux ATP-binding protein ArsA.
       0.845
SHG72421.1
Polyphosphate glucokinase.
  
  
0.809
SHG59715.1
Hypothetical protein.
     
 0.808
SHG59636.1
Polyketide cyclase / dehydrase and lipid transport.
       0.800
SHG59782.1
Hypothetical protein.
       0.737
SHF58248.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
  0.731
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.723
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.688
SHG82881.1
Transketolase; Belongs to the transketolase family.
   
 
 0.687
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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