STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG72598.13-oxoacyl-[acyl-carrier protein] reductase. (263 aa)    
Predicted Functional Partners:
SHF57156.1
Amino acid adenylation domain-containing protein.
 
 0.963
SHF60278.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.804
SHG23347.1
Amino acid adenylation domain-containing protein.
  
 0.794
SHG23515.1
trans-AT polyketide synthase, acyltransferase and oxidoreductase domain-containing protein.
 0.740
SHG23202.1
trans-AT polyketide synthase, acyltransferase and oxidoreductase domain-containing protein.
 
 0.692
SHF57191.1
Amino acid adenylation domain-containing protein.
  
 0.685
SHG72641.1
Protein of unknown function.
       0.661
SHG55265.1
[acyl-carrier-protein] S-malonyltransferase.
  0.643
SHF57383.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.640
SHG23766.1
malonyl-ACP decarboxylase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.634
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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