STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG84542.1Monosaccharide ABC transporter substrate-binding protein, CUT2 family. (380 aa)    
Predicted Functional Partners:
SHG84450.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.985
SHG84502.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.967
SHH23795.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.886
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.790
SHG84408.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
     0.696
SHH23834.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.581
SHF68243.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.577
SHF68329.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 
 0.573
SHG97802.1
Ribose transport system permease protein/putative xylitol transport system permease protein.
 
  
  0.566
SHF68266.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.561
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.