STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH00975.1Transcriptional regulator, XRE family with cupin sensor. (180 aa)    
Predicted Functional Partners:
SHH01014.1
Transcriptional regulator, XRE family with cupin sensor.
 
    
0.835
SHF62904.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
 0.610
SHH01051.1
Peptide/nickel transport system substrate-binding protein.
       0.444
SHH01094.1
Peptide/nickel transport system permease protein.
       0.444
SHH01135.1
Peptide/nickel transport system permease protein.
       0.444
SHH01174.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.444
SHH01214.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.444
SHH01251.1
Protein of unknown function.
       0.420
SHH01287.1
Xaa-Pro aminopeptidase.
       0.420
SHH19171.1
TIGR03083 family protein.
  
   0.420
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.