STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH09655.1precorrin-6Y C5,15-methyltransferase (decarboxylating). (403 aa)    
Predicted Functional Partners:
SHH09464.1
precorrin-8X methylmutase.
 
 
 0.999
SHH09507.1
Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase.
 
 
 0.999
SHH09619.1
Precorrin-4/cobalt-precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 0.999
SHH09540.1
precorrin-6A reductase.
 
 0.997
SHH09579.1
precorrin-6A synthase (deacetylating).
 
 
 0.974
SHH09387.1
Cobaltochelatase CobN subunit.
 
  
 0.970
SHG60939.1
uroporphyrinogen-III C-methyltransferase.
 
 
 0.966
SHH09956.1
Adenosylcobinamide kinase.
  
 
 0.966
SHH09427.1
precorrin-3B synthase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.965
SHG14090.1
Sirohydrochlorin ferrochelatase.
    
 0.940
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.