STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH10299.1F420-dependent oxidoreductase, G6PDH family. (324 aa)    
Predicted Functional Partners:
SHF57156.1
Amino acid adenylation domain-containing protein.
   
 0.866
SHH26891.1
Coenzyme F420-0:L-glutamate ligase.
 
  
 0.751
SHH26935.1
LPPG:FO 2-phospho-L-lactate transferase.
  
   
 0.738
SHH10332.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
       0.737
SHH10369.1
Hypothetical protein.
       0.737
SHH05167.1
Luciferase-like monooxygenase.
  
     0.717
SHF72890.1
Luciferase-like monooxygenase.
  
     0.700
SHH40481.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.675
SHF61774.1
2-phospho-L-lactate guanylyltransferase.
  
   
 0.632
SHH10262.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
    
  0.611
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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