STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH24344.1Dehydrogenase (flavoprotein). (469 aa)    
Predicted Functional Partners:
SHF57156.1
Amino acid adenylation domain-containing protein.
  
 
 0.906
SHH24299.1
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
     0.826
SHH24259.1
Hypothetical protein.
 
     0.815
SHG23347.1
Amino acid adenylation domain-containing protein.
 
  
 0.791
SHH24224.1
Acyl carrier protein.
       0.773
SHH24384.1
Lysophospholipase L1.
       0.773
SHH24476.1
Kef-type K+ transport system, membrane component KefB.
 
    0.770
SHG74465.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.769
SHH24183.1
P-aminobenzoate N-oxygenase AurF.
 
     0.754
SHF64385.1
Electron transfer flavoprotein beta subunit.
  
 
 0.737
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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