STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH28527.1Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family. (353 aa)    
Predicted Functional Partners:
SHG99038.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 0.985
SHH28483.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  0.980
SHH28441.1
ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
  
 0.960
SHF68329.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 0.956
SHH23874.1
Allose-binding protein.
 0.945
SHH23795.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 0.917
SHF68301.1
Ribose transport system ATP-binding protein.
  0.916
SHG97850.1
Ribose transport system ATP-binding protein/rhamnose transport system ATP-binding protein.
  0.916
SHG99079.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  0.916
SHG97764.1
Ribose transport system substrate-binding protein.
  
  0.887
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.