STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH47764.1PPOX class probable F420-dependent enzyme. (138 aa)    
Predicted Functional Partners:
SHF78606.1
PPOX class probable F420-dependent enzyme.
  
     0.655
SHH47803.1
Hypothetical protein.
       0.648
SHH47843.1
DNA-3-methyladenine glycosylase I.
       0.648
SHH47721.1
enoyl-CoA hydratase.
       0.562
SHF47759.1
Proteasome assembly chaperone (PAC2) family protein.
  
    0.550
SHH10299.1
F420-dependent oxidoreductase, G6PDH family.
  
     0.493
SHH47881.1
Phospholipase C.
       0.485
SHF68690.1
PAC2 family protein.
   
    0.422
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.