STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH48894.1Phosphomannomutase. (456 aa)    
Predicted Functional Partners:
SHH49043.1
Mannose-6-phosphate isomerase, type 1.
  
 
 0.982
SHH48975.1
Phospho-glucose isomerase C-terminal SIS domain-containing protein.
  
 
  0.957
SHH26663.1
Mannose-1-phosphate guanylyltransferase.
  
 
 0.955
SHH48929.1
Hypothetical protein.
    
  0.855
SHF99815.1
Phosphomannomutase.
     
0.832
SHH48862.1
Protein of unknown function.
       0.824
SHF65363.1
Starch phosphorylase.
 
 
 0.796
SHH56670.1
UTP--glucose-1-phosphate uridylyltransferase.
  
 0.723
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
 
   
 0.652
SHH48830.1
Zinicin-like metallopeptidase.
       0.642
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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