STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH62244.1P-aminobenzoate N-oxygenase AurF. (306 aa)    
Predicted Functional Partners:
SHH62274.1
ferredoxin--NADP+ reductase.
 
 
  0.959
SHG06605.1
Protein of unknown function.
 
     0.745
SHF53878.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
  
 0.704
SHF53781.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 0.699
SHG48916.1
Propane monooxygenase reductase subunit.
  
 0.677
SHG52011.1
Ferredoxin-NADP reductase.
  
 0.677
SHG97889.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
  
 0.677
SHH02298.1
Ferredoxin-NADP reductase.
  
 0.677
SHH03998.1
Ferredoxin-NADP reductase.
  
 0.677
SHG25172.1
Transcriptional regulator, TetR family.
  
     0.556
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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