STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH62376.1NADPH-dependent FMN reductase. (150 aa)    
Predicted Functional Partners:
SHH62418.1
Polyketide cyclase / dehydrase and lipid transport.
       0.773
SHH62341.1
Hypothetical protein.
       0.678
SHG01633.1
Hypothetical protein.
   
    0.515
SHG20330.1
Transmembrane protein of unknown function.
   
    0.515
SHG25145.1
P-aminobenzoate N-oxygenase AurF.
  
     0.501
SHH62310.1
Hypothetical protein.
       0.469
SHH24183.1
P-aminobenzoate N-oxygenase AurF.
  
     0.453
SHG06605.1
Protein of unknown function.
  
     0.438
SHH02415.1
Catalase; Belongs to the catalase family.
  
  
 0.420
SHF53603.1
Polyketide cyclase / dehydrase and lipid transport.
 
    0.415
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.