STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM03176.1Hypothetical conserved protein. (502 aa)    
Predicted Functional Partners:
GAM03177.1
Pilus biosynthesis protein TadE.
 
    0.948
GAM03178.1
Hypothetical conserved protein.
 
     0.928
GAM05799.1
Pilus assembly protein CpaE.
 
    0.874
GAM05802.1
Pilus assembly protein CpaB.
 
    0.871
GAM05798.1
Tight adherence protein B.
 
  
 0.846
GAM05797.1
Tight adherence protein C.
 
    0.832
GAM06657.1
Dihydrolipoamide acetyltransferase.
 
    0.799
GAM05801.1
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
  
 0.779
GAM05800.1
Pilus assembly protein CpaD.
 
     0.753
GAM04652.1
Hypothetical conserved protein.
  
    0.705
Your Current Organism:
Novosphingobium sp. MBES04
NCBI taxonomy Id: 1206458
Other names: N. sp. MBES04
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.