STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM05960.1Sodium/hydrogen exchanger. (424 aa)    
Predicted Functional Partners:
GAM05959.1
Hypothetical protein.
       0.592
GAM04947.1
Hypothetical protein.
   
 
 0.551
GAM06623.1
Cation transport ATPase.
   
 
 0.548
GAM03887.1
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.480
GAM07219.1
Hypothetical protein.
   
 
 0.480
GAM07220.1
Hypothetical protein.
   
 
 0.480
GAM07221.1
Hypothetical protein.
   
 
 0.480
GAM03152.1
Hypothetical conserved protein.
    
 0.433
GAM05912.1
Hypothetical conserved protein.
    
 0.433
GAM05981.1
Ankyrin.
    
 0.433
Your Current Organism:
Novosphingobium sp. MBES04
NCBI taxonomy Id: 1206458
Other names: N. sp. MBES04
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.