STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN7_1920General transcriptional corepressor. (662 aa)    
Predicted Functional Partners:
BN7_6214
General transcriptional corepressor.
    
 0.984
BN7_1278
Transcription factor.
    
 0.961
BN7_1192
Set1 complex component.
    
 0.953
BN7_307
Vegetative incompatibility protein.
   
 0.953
BN7_486
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
   
 0.948
BN7_3965
Histone H3.1.
    
 0.933
BN7_2215
DNA damage response protein kinase DUN1; Belongs to the protein kinase superfamily.
    
  0.908
BN7_1573
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.883
BN7_1780
Ubiquitin C.
    
  0.854
BN7_2796
40S ribosomal protein S27a.
   
  0.851
Your Current Organism:
Wickerhamomyces ciferrii
NCBI taxonomy Id: 1206466
Other names: W. ciferrii NRRL Y-1031, Wickerhamomyces ciferrii NRRL Y-1031
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.