Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BN7_1603 | BN7_2264 | K0KKR6 | K0KCB5 | tRNA ligase. | Putative RNA 2'-phosphotransferase. | 0.533 |
| BN7_1603 | BN7_2835 | K0KKR6 | K0KM78 | tRNA ligase. | Putative tRNA-splicing endonuclease subunit. | 0.483 |
| BN7_1603 | BN7_4433 | K0KKR6 | K0KTZ0 | tRNA ligase. | tRNA-splicing endonuclease subunit. | 0.435 |
| BN7_1603 | BN7_5303 | K0KKR6 | K0KXB7 | tRNA ligase. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.507 |
| BN7_1603 | BN7_6345 | K0KKR6 | K0KXI0 | tRNA ligase. | tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] | 0.444 |
| BN7_2264 | BN7_1603 | K0KCB5 | K0KKR6 | Putative RNA 2'-phosphotransferase. | tRNA ligase. | 0.533 |
| BN7_2264 | BN7_2835 | K0KCB5 | K0KM78 | Putative RNA 2'-phosphotransferase. | Putative tRNA-splicing endonuclease subunit. | 0.442 |
| BN7_2264 | BN7_5303 | K0KCB5 | K0KXB7 | Putative RNA 2'-phosphotransferase. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.483 |
| BN7_2264 | BN7_6345 | K0KCB5 | K0KXI0 | Putative RNA 2'-phosphotransferase. | tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] | 0.444 |
| BN7_2570b | BN7_5303 | K0KNQ0 | K0KXB7 | Zinc phosphodiesterase. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.560 |
| BN7_2835 | BN7_1603 | K0KM78 | K0KKR6 | Putative tRNA-splicing endonuclease subunit. | tRNA ligase. | 0.483 |
| BN7_2835 | BN7_2264 | K0KM78 | K0KCB5 | Putative tRNA-splicing endonuclease subunit. | Putative RNA 2'-phosphotransferase. | 0.442 |
| BN7_2835 | BN7_4433 | K0KM78 | K0KTZ0 | Putative tRNA-splicing endonuclease subunit. | tRNA-splicing endonuclease subunit. | 0.592 |
| BN7_2835 | BN7_5303 | K0KM78 | K0KXB7 | Putative tRNA-splicing endonuclease subunit. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.892 |
| BN7_2835 | BN7_6345 | K0KM78 | K0KXI0 | Putative tRNA-splicing endonuclease subunit. | tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] | 0.966 |
| BN7_2835 | CLP1 | K0KM78 | K0KC64 | Putative tRNA-splicing endonuclease subunit. | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | 0.808 |
| BN7_2835 | SYR1 | K0KM78 | K0KIR3 | Putative tRNA-splicing endonuclease subunit. | Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.483 |
| BN7_4172 | BN7_5303 | K0KTK1 | K0KXB7 | Homoserine dehydrogenase. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.506 |
| BN7_4433 | BN7_1603 | K0KTZ0 | K0KKR6 | tRNA-splicing endonuclease subunit. | tRNA ligase. | 0.435 |
| BN7_4433 | BN7_2835 | K0KTZ0 | K0KM78 | tRNA-splicing endonuclease subunit. | Putative tRNA-splicing endonuclease subunit. | 0.592 |
page 1 of 3