STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN7_5726Zinc finger protein. (444 aa)    
Predicted Functional Partners:
NMD3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.926
BN7_2147
Large subunit GTPase 1.
   
 
 0.917
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
   
 
 0.893
BN7_6092
RRM domain-containing protein.
    
 
 0.825
BN7_2701
60S ribosomal protein L24-A.
    
 
 0.816
BN7_2515
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
    
 
 0.803
BN7_2566
60S ribosomal protein L3.
    
 
 0.802
BN7_4003
60S ribosomal protein L25-B; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.800
BN7_3460
60S ribosomal protein L22.
    
   0.797
BN7_1528
60S ribosomal protein L7-A.
   
 
 0.789
Your Current Organism:
Wickerhamomyces ciferrii
NCBI taxonomy Id: 1206466
Other names: W. ciferrii NRRL Y-1031, Wickerhamomyces ciferrii NRRL Y-1031
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.