STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308455_01113Unannotated protein. (324 aa)    
Predicted Functional Partners:
GCA_000308455_05846
Unannotated protein.
    
  0.624
GCA_000308455_01114
Unannotated protein.
       0.557
GCA_000308455_01115
Unannotated protein.
 
     0.525
GCA_000308455_06110
Unannotated protein.
 
    0.520
GCA_000308455_06083
Unannotated protein.
  
     0.501
GCA_000308455_03367
Unannotated protein.
  
     0.438
GCA_000308455_03627
Unannotated protein.
  
     0.424
GCA_000308455_03368
Unannotated protein.
  
     0.419
GCA_000308455_02220
Unannotated protein.
  
     0.403
GCA_000308455_04204
Unannotated protein.
  
     0.400
Your Current Organism:
Nocardia abscessus
NCBI taxonomy Id: 1206723
Other names: N. abscessus NBRC 100374, Nocardia abscessus ATCC BAA-279, Nocardia abscessus DSM 44432, Nocardia abscessus IFM 10029, Nocardia abscessus JCM 10984, Nocardia abscessus NBRC 100374
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.