STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308455_03689Unannotated protein. (271 aa)    
Predicted Functional Partners:
GCA_000308455_03688
Unannotated protein.
       0.468
GCA_000308455_03619
Unannotated protein.
     
 0.443
GCA_000308455_01931
Unannotated protein.
      
 0.438
GCA_000308455_03690
Unannotated protein.
       0.425
GCA_000308455_00248
Unannotated protein.
 
  
  0.422
GCA_000308455_04333
Unannotated protein.
 
  
  0.410
Your Current Organism:
Nocardia abscessus
NCBI taxonomy Id: 1206723
Other names: N. abscessus NBRC 100374, Nocardia abscessus ATCC BAA-279, Nocardia abscessus DSM 44432, Nocardia abscessus IFM 10029, Nocardia abscessus JCM 10984, Nocardia abscessus NBRC 100374
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.