STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308495_01832Unannotated protein. (335 aa)    
Predicted Functional Partners:
GCA_000308495_04999
Unannotated protein.
    
 0.922
GCA_000308495_05000
Unannotated protein.
    
 0.887
GCA_000308495_02913
Unannotated protein.
     
 0.884
GCA_000308495_03451
Unannotated protein.
    
  0.870
GCA_000308495_01833
Unannotated protein.
     
 0.847
GCA_000308495_01831
Unannotated protein.
     
 0.840
GCA_000308495_05012
Unannotated protein.
    
 0.799
GCA_000308495_05002
Unannotated protein.
    
 0.760
GCA_000308495_02816
Unannotated protein.
  
 
  0.727
GCA_000308495_01735
Unannotated protein.
  
     0.673
Your Current Organism:
Nocardia brevicatena
NCBI taxonomy Id: 1206725
Other names: N. brevicatena NBRC 12119, Nocardia brevicatena ATCC 15333, Nocardia brevicatena DSM 43024, Nocardia brevicatena IFM 283, Nocardia brevicatena IFO 12119, Nocardia brevicatena NBRC 12119, Nocardia brevicatena str. NBRC 12119, Nocardia brevicatena strain NBRC 12119
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.