STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308495_06337Unannotated protein. (101 aa)    
Predicted Functional Partners:
GCA_000308495_06338
Unannotated protein.
 
  
 0.944
GCA_000308495_06339
Unannotated protein.
       0.773
GCA_000308495_05310
Unannotated protein.
  
     0.704
GCA_000308495_05406
Unannotated protein.
  
     0.698
GCA_000308495_06341
Unannotated protein.
 
     0.686
GCA_000308495_03581
Unannotated protein.
  
     0.683
GCA_000308495_03210
Unannotated protein.
  
     0.674
GCA_000308495_01588
Unannotated protein.
  
     0.667
GCA_000308495_04635
Unannotated protein.
  
     0.665
GCA_000308495_06336
Unannotated protein.
 
     0.641
Your Current Organism:
Nocardia brevicatena
NCBI taxonomy Id: 1206725
Other names: N. brevicatena NBRC 12119, Nocardia brevicatena ATCC 15333, Nocardia brevicatena DSM 43024, Nocardia brevicatena IFM 283, Nocardia brevicatena IFO 12119, Nocardia brevicatena NBRC 12119, Nocardia brevicatena str. NBRC 12119, Nocardia brevicatena strain NBRC 12119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.