STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308595_05172Unannotated protein. (155 aa)    
Predicted Functional Partners:
GCA_000308595_04507
Unannotated protein.
  
     0.701
GCA_000308595_04550
Unannotated protein.
    
  0.556
GCA_000308595_02825
Unannotated protein.
  
  
  0.512
GCA_000308595_05287
Unannotated protein.
  
  
 0.506
GCA_000308595_05171
Unannotated protein.
     
 0.468
GCA_000308595_04760
Unannotated protein.
  
  
  0.441
GCA_000308595_00247
Unannotated protein.
  
     0.431
GCA_000308595_04549
Unannotated protein.
  
     0.412
GCA_000308595_04394
Unannotated protein.
  
 
 0.405
Your Current Organism:
Nocardia higoensis
NCBI taxonomy Id: 1206730
Other names: N. higoensis NBRC 100133, Nocardia higoensis NBRC 100133, Nocardia higoensis str. NBRC 100133, Nocardia higoensis strain NBRC 100133
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.