STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308615_00935Unannotated protein. (330 aa)    
Predicted Functional Partners:
GCA_000308615_00934
Unannotated protein.
 
     0.946
GCA_000308615_00933
Unannotated protein.
 
    
0.840
GCA_000308615_01138
Unannotated protein.
  
     0.759
GCA_000308615_05653
Unannotated protein.
 
  
 0.733
GCA_000308615_02001
Unannotated protein.
   
 0.723
GCA_000308615_03373
Unannotated protein.
   
 0.703
GCA_000308615_05320
Unannotated protein.
 
   
 0.656
GCA_000308615_05654
Unannotated protein.
    
 0.651
GCA_000308615_05655
Unannotated protein.
    
 0.651
GCA_000308615_07616
Unannotated protein.
    
 0.644
Your Current Organism:
Nocardia jiangxiensis
NCBI taxonomy Id: 1206731
Other names: N. jiangxiensis NBRC 101359, Nocardia jiangxiensis NBRC 101359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.