STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308655_01761Unannotated protein. (487 aa)    
Predicted Functional Partners:
GCA_000308655_03841
Unannotated protein.
  
 0.870
GCA_000308655_03321
Unannotated protein.
   
 0.796
GCA_000308655_07002
Unannotated protein.
     
 0.759
GCA_000308655_03654
Unannotated protein.
 
 
 0.680
GCA_000308655_04354
Unannotated protein.
  
 
 0.678
GCA_000308655_06436
Unannotated protein.
 
 
 0.672
GCA_000308655_06621
Unannotated protein.
    
  0.660
GCA_000308655_01420
Unannotated protein.
   
 0.622
GCA_000308655_01791
Unannotated protein.
   
 0.622
GCA_000308655_01792
Unannotated protein.
   
 0.622
Your Current Organism:
Nocardia niigatensis
NCBI taxonomy Id: 1206733
Other names: N. niigatensis NBRC 100131, Nocardia niigatensis NBRC 100131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.