STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308655_07329Unannotated protein. (229 aa)    
Predicted Functional Partners:
GCA_000308655_07328
Unannotated protein.
 
 0.999
GCA_000308655_02611
Unannotated protein.
 
  
 0.997
GCA_000308655_04604
Unannotated protein.
 
  
 0.997
GCA_000308655_04600
Unannotated protein.
 
  
 0.983
GCA_000308655_02879
Unannotated protein.
 
   
 0.956
GCA_000308655_04985
Unannotated protein.
 
  
 0.955
GCA_000308655_07330
Unannotated protein.
  
  
 0.894
GCA_000308655_07327
Unannotated protein.
       0.811
GCA_000308655_05420
Unannotated protein.
 
 
  0.720
GCA_000308655_07326
Unannotated protein.
       0.669
Your Current Organism:
Nocardia niigatensis
NCBI taxonomy Id: 1206733
Other names: N. niigatensis NBRC 100131, Nocardia niigatensis NBRC 100131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.