STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308675_00163Unannotated protein. (472 aa)    
Predicted Functional Partners:
GCA_000308675_02677
Unannotated protein.
  
  
 0.685
GCA_000308675_05367
Unannotated protein.
  
  
 0.663
GCA_000308675_01795
Unannotated protein.
    
  0.658
GCA_000308675_03964
Unannotated protein.
  
  
  0.654
GCA_000308675_00001
Unannotated protein.
     
 0.598
GCA_000308675_00919
Unannotated protein.
   
 
 0.569
GCA_000308675_05264
Unannotated protein.
   
    0.536
GCA_000308675_03049
Unannotated protein.
   
  
 0.503
GCA_000308675_03622
Unannotated protein.
   
  
 0.503
GCA_000308675_05002
Unannotated protein.
   
  
 0.491
Your Current Organism:
Nocardia paucivorans
NCBI taxonomy Id: 1206734
Other names: N. paucivorans NBRC 100373, Nocardia paucivorans NBRC 100373
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.